PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN42315.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 358aa    MW: 39842 Da    PI: 4.7015
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN42315.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH322.2e-102803201055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  KHN42315.1 280 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 320
                 9******************97.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.148270319IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-14273336IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-12275330IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.3E-11276325IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.13E-12279324No hitNo description
PfamPF000101.1E-7280320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0016787Molecular Functionhydrolase activity
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MEPVQLVSEE WGSLCGFHTT EEADFMVQLF GGNTSVTEKH SGNTTFGFWP GHESTIVAMT  60
DTNSNSYLPP NFTDTNFLCF SQGSSSSTDN SGNNIFSTTS SGTYSCDPET NFDSVPMVLC  120
LGDAKFSPHS FQCDDYLSQQ INENTDEESS LDPWKLAIAD NNLQAKREYE MMVSEPVEED  180
RSRNLENLPK RLKSSIEVPK TSRNAKSRKN SKSASTSNDE DDRSLSLQVQ RNNSCFSQSD  240
SNAYLEPNGG ASKDPAPPNL HRKSRATTSA ATDPQSLYAR KRRERINERL RILQNLVPNG  300
TKVDISTMLE EAVQYVKFLQ LQIKLLSSED LWMYAPIVYN GINIGLDLGI SPTKGRSM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2351770.0AC235177.1 Glycine max strain Williams 82 clone GM_WBb0007H11, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003555292.10.0PREDICTED: transcription factor bHLH84-like
TrEMBLA0A0B2SB350.0A0A0B2SB35_GLYSO; Transcription factor bHLH85
STRINGGLYMA20G26980.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.14e-39bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]